IL_9HUS_058

3D structure

PDB id

9HUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGAG*UGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HUS_058 not in the Motif Atlas

Geometric match to IL_9E6Q_021

Geometric discrepancy: 0.1127

The information below is about IL_9E6Q_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45790.2

Basepair signature

cWW-tSH-L-tHS-cWW

Number of instances in this motif group

12

Unit IDs

9HUS|1|b|C|1526
9HUS|1|b|G|1527
9HUS|1|b|A|1528
9HUS|1|b|G|1529
*
9HUS|1|b|U|1542
9HUS|1|b|G|1543
9HUS|1|b|A|1544
9HUS|1|b|A|1545
9HUS|1|b|G|1546

Current chains

Chain b

23S rRNA

Nearby chains