IL_9HUS_105

3D structure

PDB id

9HUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HUS_105 not in the Motif Atlas

Homologous match to IL_7A0S_101

Geometric discrepancy: 0.4879

The information below is about IL_7A0S_101

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48489.1

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

8

Unit IDs

9HUS|1|b|U|2847
9HUS|1|b|G|2848
9HUS|1|b|U|2849
9HUS|1|b|A|2850
9HUS|1|b|A|2851
9HUS|1|b|G|2852
*
9HUS|1|b|U|2865
9HUS|1|b|U|2866
9HUS|1|b|G|2867
9HUS|1|b|A|2868
9HUS|1|b|G|2869

Current chains

Chain b

23S rRNA

Nearby chains

Chain n

Large ribosomal subunit protein bL17

Chain p

Large ribosomal subunit protein bL19