IL_9HY6_002
3D structure
- PDB id
- 9HY6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with nascent chain at linker length of 31 amino acids, with mRNA, P-site and A-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGUCCC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- 9HY6|1|a|U|25
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HY6_002 not in the Motif Atlas
- Homologous match to IL_7A0S_103
- Geometric discrepancy: 0.3642
- The information below is about IL_7A0S_103
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18472.5
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
9HY6|1|a|G|23
9HY6|1|a|G|24
9HY6|1|a|U|25
9HY6|1|a|C|26
9HY6|1|a|C|27
9HY6|1|a|C|28
*
9HY6|1|a|G|56
9HY6|1|a|A|57
9HY6|1|a|A|58
9HY6|1|a|A|59
9HY6|1|a|C|60
Current chains
- Chain a
- 5S rRNA
Nearby chains
- Chain f
- Large ribosomal subunit protein uL5
- Chain o
- Large ribosomal subunit protein uL18
Coloring options: