IL_9I14_147

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GCGGAGC*GAACCU

Length

13 nucleotides

Bulged bases

9I14|1|L5|C|4741

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|G|4740
9I14|1|L5|C|4741
9I14|1|L5|G|4742
9I14|1|L5|G|4743
9I14|1|L5|A|4744
9I14|1|L5|G|4745
9I14|1|L5|C|4746
*
9I14|1|L5|G|4954
9I14|1|L5|A|4955
9I14|1|L5|A|4956
9I14|1|L5|C|4957
9I14|1|L5|C|4958
9I14|1|L5|U|4959

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA