IL_9I14_180

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GGAUAAC*GCUAAUA(OMC)

Length

15 nucleotides

Bulged bases

9I14|1|S2|U|172

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|S2|G|145
9I14|1|S2|G|146
9I14|1|S2|A|147
9I14|1|S2|U|148
9I14|1|S2|A|149
9I14|1|S2|A|150
9I14|1|S2|C|151
*
9I14|1|S2|G|167
9I14|1|S2|C|168
9I14|1|S2|U|169
9I14|1|S2|A|170
9I14|1|S2|A|171
9I14|1|S2|U|172
9I14|1|S2|A|173
9I14|1|S2|OMC|174

Current chains

Chain S2

SSU 18S rRNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24