IL_9I14_199
3D structure
- PDB id
- 9I14 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- GUU(A2M)AAA*UC
- Length
- 9 nucleotides
- Bulged bases
- 9I14|1|S2|A2M|668
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I14_199 not in the Motif Atlas
- Homologous match to IL_9PN5_174
- Geometric discrepancy: 0.0775
- The information below is about IL_9PN5_174
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.4
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
9I14|1|S2|G|665
9I14|1|S2|U|666
9I14|1|S2|U|667
9I14|1|S2|A2M|668
9I14|1|S2|A|669
9I14|1|S2|A|670
9I14|1|S2|A|671
*
9I14|1|S2|U|1161
9I14|1|S2|C|1162
Current chains
- Chain S2
- SSU 18S rRNA
Nearby chains
- Chain SX
- 40S ribosomal protein S23
- Chain Sa
- 40S ribosomal protein S26
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