IL_9I1W_025

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GUUUG*CGCAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|G|668
9I1W|1|1|U|669
9I1W|1|1|U|670
9I1W|1|1|U|671
9I1W|1|1|G|672
*
9I1W|1|1|C|684
9I1W|1|1|G|685
9I1W|1|1|C|686
9I1W|1|1|A|687
9I1W|1|1|C|688

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4-like protein

Chain LL

60S ribosomal protein L13

Chain LN

Ribosomal protein L15

Chain La

60S ribosomal protein L28-like protein