IL_9I1W_031
3D structure
- PDB id
- 9I1W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- (OMG)AAAG*CUAG(PSU)AGC
- Length
- 13 nucleotides
- Bulged bases
- 9I1W|1|1|A|915, 9I1W|1|1|G|919
- QA status
- Modified nucleotides: OMG, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I1W|1|1|OMG|787
9I1W|1|1|A|788
9I1W|1|1|A|789
9I1W|1|1|A|790
9I1W|1|1|G|791
*
9I1W|1|1|C|913
9I1W|1|1|U|914
9I1W|1|1|A|915
9I1W|1|1|G|916
9I1W|1|1|PSU|917
9I1W|1|1|A|918
9I1W|1|1|G|919
9I1W|1|1|C|920
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4-like protein
- Chain LL
- 60S ribosomal protein L13
- Chain LN
- Ribosomal protein L15
- Chain La
- 60S ribosomal protein L28-like protein
- Chain Lj
- Ribosomal protein L37
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