IL_9I1W_041
3D structure
- PDB id
- 9I1W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GAGGUAA*(PSU)AAAUAU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I1W|1|1|G|973
9I1W|1|1|A|974
9I1W|1|1|G|975
9I1W|1|1|G|976
9I1W|1|1|U|977
9I1W|1|1|A|978
9I1W|1|1|A|979
*
9I1W|1|1|PSU|1035
9I1W|1|1|A|1036
9I1W|1|1|A|1037
9I1W|1|1|A|1038
9I1W|1|1|U|1039
9I1W|1|1|A|1040
9I1W|1|1|U|1041
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain LF
- 60S ribosomal protein l7-like protein
- Chain LI
- 60S ribosomal protein L10-like protein
- Chain LT
- 60S ribosomal protein l21-like protein
Coloring options: