IL_9I1W_058

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UCUUGACAG*CCGAA

Length

14 nucleotides

Bulged bases

9I1W|1|1|U|1204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|U|1201
9I1W|1|1|C|1202
9I1W|1|1|U|1203
9I1W|1|1|U|1204
9I1W|1|1|G|1205
9I1W|1|1|A|1206
9I1W|1|1|C|1207
9I1W|1|1|A|1208
9I1W|1|1|G|1209
*
9I1W|1|1|C|1266
9I1W|1|1|C|1267
9I1W|1|1|G|1268
9I1W|1|1|A|1269
9I1W|1|1|A|1270

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LS

60S ribosomal protein L20

Chain Lm

Putative ribosomal protein

Chain Ls

60S acidic ribosomal protein P0