IL_9I1W_065

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GUAGU(A2M)(OMG)*CGAAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|G|1427
9I1W|1|1|U|1428
9I1W|1|1|A|1429
9I1W|1|1|G|1430
9I1W|1|1|U|1431
9I1W|1|1|A2M|1432
9I1W|1|1|OMG|1433
*
9I1W|1|1|C|2317
9I1W|1|1|G|2318
9I1W|1|1|A|2319
9I1W|1|1|A|2320
9I1W|1|1|A|2321
9I1W|1|1|C|2322

Current chains

Chain 1

26S rRNA

Nearby chains

Chain 4

5.8S ribosomal RNA; 5.8S rRNA

Chain LC

60S ribosomal protein L4-like protein

Chain LP

60S ribosomal protein l17-like protein