IL_9I1W_097

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UCAAAGU*AACCAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|U|2174
9I1W|1|1|C|2175
9I1W|1|1|A|2176
9I1W|1|1|A|2177
9I1W|1|1|A|2178
9I1W|1|1|G|2179
9I1W|1|1|U|2180
*
9I1W|1|1|A|2191
9I1W|1|1|A|2192
9I1W|1|1|C|2193
9I1W|1|1|C|2194
9I1W|1|1|A|2195
9I1W|1|1|A|2196
9I1W|1|1|G|2197

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LA

60S ribosomal protein L2-like protein

Chain Li

60S ribosomal protein L36

Chain Lo

60S ribosomal protein L44-like protein