IL_9I1W_106
3D structure
- PDB id
- 9I1W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- AUGAAGC*GGG(PSU)
- Length
- 11 nucleotides
- Bulged bases
- 9I1W|1|1|G|2485, 9I1W|1|1|G|2544, 9I1W|1|1|G|2545
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I1W|1|1|A|2483
9I1W|1|1|U|2484
9I1W|1|1|G|2485
9I1W|1|1|A|2486
9I1W|1|1|A|2487
9I1W|1|1|G|2488
9I1W|1|1|C|2489
*
9I1W|1|1|G|2543
9I1W|1|1|G|2544
9I1W|1|1|G|2545
9I1W|1|1|PSU|2546
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LA
- 60S ribosomal protein L2-like protein
- Chain LG
- 60S ribosomal protein L8
- Chain LX
- 60S ribosomal protein L25-like protein
Coloring options: