IL_9I1W_134

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

AUUCCUC*GUAAUU

Length

13 nucleotides

Bulged bases

9I1W|1|1|A|3200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|A|3168
9I1W|1|1|U|3169
9I1W|1|1|U|3170
9I1W|1|1|C|3171
9I1W|1|1|C|3172
9I1W|1|1|U|3173
9I1W|1|1|C|3174
*
9I1W|1|1|G|3198
9I1W|1|1|U|3199
9I1W|1|1|A|3200
9I1W|1|1|A|3201
9I1W|1|1|U|3202
9I1W|1|1|U|3203

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LM

60S ribosomal protein L14-like protein

Chain LO

60S ribosomal protein L16-like protein

Chain Lf

60S ribosomal protein l33-like protein