IL_9I2D_023

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9I2D|1|L5|U|467, 9I2D|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|L5|A|466
9I2D|1|L5|U|467
9I2D|1|L5|U|468
9I2D|1|L5|C|469
9I2D|1|L5|A|470
9I2D|1|L5|A|471
9I2D|1|L5|C|472
*
9I2D|1|L5|G|682
9I2D|1|L5|C|683
9I2D|1|L5|G|684
9I2D|1|L5|C|685
9I2D|1|L5|A|686
9I2D|1|L5|U|687
9I2D|1|L5|U|688
9I2D|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28