IL_9I2D_077

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

9I2D|1|L5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|L5|U|1957
9I2D|1|L5|A|1958
9I2D|1|L5|U|1959
9I2D|1|L5|A|1960
9I2D|1|L5|G|1961
9I2D|1|L5|A|1962
9I2D|1|L5|C|1963
9I2D|1|L5|A|1964
9I2D|1|L5|G|1965
*
9I2D|1|L5|C|2022
9I2D|1|L5|C|2023
9I2D|1|L5|G|2024
9I2D|1|L5|A|2025
9I2D|1|L5|A|2026

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lm

Ubiquitin-60S ribosomal protein L40

Chain Ls

60S acidic ribosomal protein P0