IL_9I2D_102
3D structure
- PDB id
- 9I2D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 10 amino acid ARF1-linker
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I2D_102 not in the Motif Atlas
- Geometric match to IL_8GLP_305
- Geometric discrepancy: 0.0312
- The information below is about IL_8GLP_305
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 12
Unit IDs
9I2D|1|L5|G|2847
9I2D|1|L5|G|2848
9I2D|1|L5|A|2849
9I2D|1|L5|A|2850
9I2D|1|L5|G|2851
9I2D|1|L5|U|2852
9I2D|1|L5|C|2853
9I2D|1|L5|G|2854
9I2D|1|L5|G|2855
*
9I2D|1|L5|C|3837
9I2D|1|L5|U|3838
9I2D|1|L5|G|3839
9I2D|1|L5|U|3840
9I2D|1|L5|C|3841
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LV
- 60S ribosomal protein L23
Coloring options: