IL_9I2D_189

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9I2D|1|S2|U|361, 9I2D|1|S2|C|399

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|S2|U|359
9I2D|1|S2|A|360
9I2D|1|S2|U|361
9I2D|1|S2|C|362
9I2D|1|S2|A|363
9I2D|1|S2|A|364
*
9I2D|1|S2|U|396
9I2D|1|S2|G|397
9I2D|1|S2|A|398
9I2D|1|S2|C|399
9I2D|1|S2|C|400
9I2D|1|S2|A|401
9I2D|1|S2|C|402
9I2D|1|S2|G|403

Current chains

Chain S2

18S rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11

Chain SX

40S ribosomal protein S23