3D structure

PDB id
9I2E (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human ribosome (combined translational states)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.95 Å

Loop

Sequence
CUCAGUAC*GGAACCG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9I2E|1|L5|C|4596
9I2E|1|L5|U|4597
9I2E|1|L5|C|4598
9I2E|1|L5|A|4599
9I2E|1|L5|G|4600
9I2E|1|L5|U|4601
9I2E|1|L5|A|4602
9I2E|1|L5|C|4603
*
9I2E|1|L5|G|4608
9I2E|1|L5|G|4609
9I2E|1|L5|A|4610
9I2E|1|L5|A|4611
9I2E|1|L5|C|4612
9I2E|1|L5|C|4613
9I2E|1|L5|G|4614

Current chains

Chain L5
28S rRNA

Nearby chains

Chain CB
Elongation factor 2
Chain LB
60S ribosomal protein L3
Chain LH
60S ribosomal protein L9
Chain LV
60S ribosomal protein L23
Chain Lm
Ubiquitin-60S ribosomal protein L40

Coloring options:

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