IL_9I3L_036

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCAAG*CAACC

Length

10 nucleotides

Bulged bases

9I3L|1|b|A|879

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9I3L_036 not in the Motif Atlas

Geometric match to IL_8P9A_379

Geometric discrepancy: 0.304

The information below is about IL_8P9A_379

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_21667.2

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

9I3L|1|b|G|877
9I3L|1|b|C|878
9I3L|1|b|A|879
9I3L|1|b|A|880
9I3L|1|b|G|881
*
9I3L|1|b|C|900
9I3L|1|b|A|901
9I3L|1|b|A|902
9I3L|1|b|C|903
9I3L|1|b|C|904

Current chains

Chain b

23S rRNA

Nearby chains

Chain m

50S ribosomal protein L16