IL_9I3L_082
3D structure
- PDB id
- 9I3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 9I3L|1|b|A|1942, 9I3L|1|b|U|1948, 9I3L|1|b|U|1967
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I3L_082 not in the Motif Atlas
- Homologous match to IL_7A0S_072
- Geometric discrepancy: 0.1105
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
9I3L|1|b|C|1938
9I3L|1|b|G|1939
9I3L|1|b|A|1940
9I3L|1|b|A|1941
9I3L|1|b|A|1942
9I3L|1|b|U|1943
9I3L|1|b|U|1944
9I3L|1|b|C|1945
9I3L|1|b|C|1946
9I3L|1|b|U|1947
9I3L|1|b|U|1948
9I3L|1|b|G|1949
*
9I3L|1|b|C|1965
9I3L|1|b|C|1966
9I3L|1|b|U|1967
9I3L|1|b|G|1968
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: