IL_9I3L_104

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

9I3L|1|b|A|2606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9I3L_104 not in the Motif Atlas

Geometric match to IL_8B0X_159

Geometric discrepancy: 0.1933

The information below is about IL_8B0X_159

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

9I3L|1|b|C|2595
9I3L|1|b|G|2596
*
9I3L|1|b|C|2605
9I3L|1|b|A|2606
9I3L|1|b|G|2607

Current chains

Chain b

23S rRNA

Nearby chains

Chain Z

Transfer RNA; tRNA

Chain c

Large ribosomal subunit protein uL2

Chain y

Large ribosomal subunit protein bL27

Chain z

Gelation factor