IL_9I5T_030
3D structure
- PDB id
- 9I5T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S subunit of P. gingivalis ribosome with Lefamulin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 9I5T|1|A|A|1191
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I5T_030 not in the Motif Atlas
- Geometric match to IL_8B0X_097
- Geometric discrepancy: 0.0556
- The information below is about IL_8B0X_097
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 25
Unit IDs
9I5T|1|A|C|1031
9I5T|1|A|U|1032
9I5T|1|A|A|1033
9I5T|1|A|A|1034
9I5T|1|A|G|1035
*
9I5T|1|A|C|1188
9I5T|1|A|G|1189
9I5T|1|A|A|1190
9I5T|1|A|A|1191
9I5T|1|A|G|1192
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein uL30
- Chain T
- Large ribosomal subunit protein bL20
- Chain U
- Large ribosomal subunit protein bL21
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