IL_9I5T_053

3D structure

PDB id

9I5T (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit of P. gingivalis ribosome with Lefamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UGCAAAA*UGAGGUAUA

Length

16 nucleotides

Bulged bases

9I5T|1|A|A|1810, 9I5T|1|A|U|1829

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I5T|1|A|U|1807
9I5T|1|A|G|1808
9I5T|1|A|C|1809
9I5T|1|A|A|1810
9I5T|1|A|A|1811
9I5T|1|A|A|1812
9I5T|1|A|A|1813
*
9I5T|1|A|U|1822
9I5T|1|A|G|1823
9I5T|1|A|A|1824
9I5T|1|A|G|1825
9I5T|1|A|G|1826
9I5T|1|A|U|1827
9I5T|1|A|A|1828
9I5T|1|A|U|1829
9I5T|1|A|A|1830

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

Large ribosomal subunit protein uL2