IL_9I5T_070

3D structure

PDB id

9I5T (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit of P. gingivalis ribosome with Lefamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGGAG*CGCAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I5T|1|A|G|2350
9I5T|1|A|G|2351
9I5T|1|A|G|2352
9I5T|1|A|A|2353
9I5T|1|A|G|2354
*
9I5T|1|A|C|2365
9I5T|1|A|G|2366
9I5T|1|A|C|2367
9I5T|1|A|A|2368
9I5T|1|A|C|2369

Current chains

Chain A

23S rRNA

Nearby chains

Chain 5

Large ribosomal subunit protein bL33

Chain 7

Large ribosomal subunit protein bL35

Chain Z

Large ribosomal subunit protein bL27