IL_9I5V_104

3D structure

PDB id

9I5V (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S P. gingivalis ribosome erm-delta-porN strain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUUAU*ACCGUAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I5V|1|a|U|444
9I5V|1|a|U|445
9I5V|1|a|U|446
9I5V|1|a|A|447
9I5V|1|a|U|448
*
9I5V|1|a|A|487
9I5V|1|a|C|488
9I5V|1|a|C|489
9I5V|1|a|G|490
9I5V|1|a|U|491
9I5V|1|a|A|492
9I5V|1|a|A|493
9I5V|1|a|G|494

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

Small ribosomal subunit protein bS16

Chain l

Small ribosomal subunit protein uS4