IL_9I5V_128
3D structure
- PDB id
- 9I5V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S P. gingivalis ribosome erm-delta-porN strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GACAAAG*CUAAAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I5V_128 not in the Motif Atlas
- Geometric match to IL_8B0X_053
- Geometric discrepancy: 0.3261
- The information below is about IL_8B0X_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
9I5V|1|a|G|1245
9I5V|1|a|A|1246
9I5V|1|a|C|1247
9I5V|1|a|A|1248
9I5V|1|a|A|1249
9I5V|1|a|A|1250
9I5V|1|a|G|1251
*
9I5V|1|a|C|1282
9I5V|1|a|U|1283
9I5V|1|a|A|1284
9I5V|1|a|A|1285
9I5V|1|a|A|1286
9I5V|1|a|C|1287
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain J
- Small ribosomal subunit protein uS9
- Chain K
- Small ribosomal subunit protein uS10
- Chain m
- Small ribosomal subunit protein uS7
Coloring options: