IL_9I78_021
3D structure
- PDB id
- 9I78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGAUAAAGGC*GUGUAAUAC
- Length
- 19 nucleotides
- Bulged bases
- 9I78|1|L1|A|510, 9I78|1|L1|U|511, 9I78|1|L1|U|560
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I78|1|L1|G|508
9I78|1|L1|G|509
9I78|1|L1|A|510
9I78|1|L1|U|511
9I78|1|L1|A|512
9I78|1|L1|A|513
9I78|1|L1|A|514
9I78|1|L1|G|515
9I78|1|L1|G|516
9I78|1|L1|C|517
*
9I78|1|L1|G|557
9I78|1|L1|U|558
9I78|1|L1|G|559
9I78|1|L1|U|560
9I78|1|L1|A|561
9I78|1|L1|A|562
9I78|1|L1|U|563
9I78|1|L1|A|564
9I78|1|L1|C|565
Current chains
- Chain L1
- 26S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4-like protein
- Chain LF
- 60S ribosomal protein l7-like protein
- Chain LM
- 60S ribosomal protein L14-like protein
- Chain LS
- 60S ribosomal protein L20
Coloring options: