IL_9I78_041
3D structure
- PDB id
- 9I78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GAGGUAA*UAAAUAU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I78|1|L1|G|973
9I78|1|L1|A|974
9I78|1|L1|G|975
9I78|1|L1|G|976
9I78|1|L1|U|977
9I78|1|L1|A|978
9I78|1|L1|A|979
*
9I78|1|L1|U|1035
9I78|1|L1|A|1036
9I78|1|L1|A|1037
9I78|1|L1|A|1038
9I78|1|L1|U|1039
9I78|1|L1|A|1040
9I78|1|L1|U|1041
Current chains
- Chain L1
- 26S rRNA
Nearby chains
- Chain L3
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- 60S ribosomal protein l5-like protein
- Chain LF
- 60S ribosomal protein l7-like protein
- Chain LI
- 60S ribosomal protein L10-like protein
- Chain LT
- 60S ribosomal protein l21-like protein
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