IL_9I78_046

3D structure

PDB id

9I78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GACUCG*CAUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I78|1|L1|G|994
9I78|1|L1|A|995
9I78|1|L1|C|996
9I78|1|L1|U|997
9I78|1|L1|C|998
9I78|1|L1|G|999
*
9I78|1|L1|C|1018
9I78|1|L1|A|1019
9I78|1|L1|U|1020
9I78|1|L1|C|1021

Current chains

Chain L1

26S rRNA

Nearby chains

Chain LD

60S ribosomal protein l5-like protein

Chain LI

60S ribosomal protein L10-like protein