IL_9I78_075

3D structure

PDB id

9I78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUAUCA*UUUAAUG

Length

13 nucleotides

Bulged bases

9I78|1|L1|U|1722

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I78|1|L1|C|1682
9I78|1|L1|U|1683
9I78|1|L1|A|1684
9I78|1|L1|U|1685
9I78|1|L1|C|1686
9I78|1|L1|A|1687
*
9I78|1|L1|U|1717
9I78|1|L1|U|1718
9I78|1|L1|U|1719
9I78|1|L1|A|1720
9I78|1|L1|A|1721
9I78|1|L1|U|1722
9I78|1|L1|G|1723

Current chains

Chain L1

26S rRNA

Nearby chains

Chain Lg

Ribosomal protein l34-like protein

Chain Lp

60S ribosomal protein L43-like protein