IL_9I89_008

3D structure

PDB id

9I89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GAGAACUG*CUUAGUACC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I89|1|A|G|190
9I89|1|A|A|191
9I89|1|A|G|192
9I89|1|A|A|193
9I89|1|A|A|194
9I89|1|A|C|195
9I89|1|A|U|196
9I89|1|A|G|197
*
9I89|1|A|C|204
9I89|1|A|U|205
9I89|1|A|U|206
9I89|1|A|A|207
9I89|1|A|G|208
9I89|1|A|U|209
9I89|1|A|A|210
9I89|1|A|C|211
9I89|1|A|C|212

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL28

Chain 7

Large ribosomal subunit protein bL34

Chain 8

Large ribosomal subunit protein bL35

Chain O

Large ribosomal subunit protein uL15