IL_9I89_038
3D structure
- PDB id
- 9I89 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- GGAAAAG*CGAAAAUGUACCGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 9I89|1|A|A|1171, 9I89|1|A|U|1174
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I89|1|A|G|1068
9I89|1|A|G|1069
9I89|1|A|A|1070
9I89|1|A|A|1071
9I89|1|A|A|1072
9I89|1|A|A|1073
9I89|1|A|G|1074
*
9I89|1|A|C|1168
9I89|1|A|G|1169
9I89|1|A|A|1170
9I89|1|A|A|1171
9I89|1|A|A|1172
9I89|1|A|A|1173
9I89|1|A|U|1174
9I89|1|A|G|1175
9I89|1|A|U|1176
9I89|1|A|A|1177
9I89|1|A|C|1178
9I89|1|A|C|1179
9I89|1|A|G|1180
9I89|1|A|G|1181
9I89|1|A|G|1182
9I89|1|A|G|1183
9I89|1|A|C|1184
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 9
- Large ribosomal subunit protein bL36
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain H
- Large ribosomal subunit protein uL3
- Chain M
- Large ribosomal subunit protein uL13
- Chain P
- Large ribosomal subunit protein uL16
Coloring options: