IL_9ISV_010

3D structure

PDB id

9ISV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Enterococcus faecalis ROOL RNA monomer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

AAAC*GAAGU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ISV_010 not in the Motif Atlas

Geometric match to IL_1U6B_004

Geometric discrepancy: 0.2484

The information below is about IL_1U6B_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20358.1

Basepair signature

cWW-L-R-L-cWW-cWW

Number of instances in this motif group

2

Unit IDs

9ISV|1|A|A|201
9ISV|1|A|A|202
9ISV|1|A|A|203
9ISV|1|A|C|204
*
9ISV|1|A|G|337
9ISV|1|A|A|338
9ISV|1|A|A|339
9ISV|1|A|G|340
9ISV|1|A|U|341

Current chains

Chain A

RNA (580-MER)

Nearby chains