IL_9J1M_012

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_012 not in the Motif Atlas

Geometric match to IL_4WF9_014

Geometric discrepancy: 0.1597

The information below is about IL_4WF9_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76658.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

4

Unit IDs

9J1M|1|A|U|375
9J1M|1|A|A|376
9J1M|1|A|G|377
*
9J1M|1|A|C|426
9J1M|1|A|G|427
9J1M|1|A|A|428
9J1M|1|A|A|429
9J1M|1|A|A|430

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

Large ribosomal subunit protein uL24