IL_9J1M_035

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

9J1M|1|A|A|1025

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_035 not in the Motif Atlas

Homologous match to IL_5J7L_275

Geometric discrepancy: 0.5006

The information below is about IL_5J7L_275

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29366.1

Basepair signature

cWW-cWW

Number of instances in this motif group

266

Unit IDs

9J1M|1|A|G|1010
9J1M|1|A|G|1011
*
9J1M|1|A|U|1024
9J1M|1|A|A|1025
9J1M|1|A|C|1026

Current chains

Chain A

23S rRNA

Nearby chains

Chain V

Large ribosomal subunit protein bL25