IL_9J1M_044
3D structure
- PDB id
- 9J1M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KU13-bond Mycobacterium tuberculosis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- CAAAGACAA*UCAAG
- Length
- 14 nucleotides
- Bulged bases
- 9J1M|1|A|A|1175
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9J1M_044 not in the Motif Atlas
- Geometric match to IL_5J7L_284
- Geometric discrepancy: 0.2725
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9J1M|1|A|C|1172
9J1M|1|A|A|1173
9J1M|1|A|A|1174
9J1M|1|A|A|1175
9J1M|1|A|G|1176
9J1M|1|A|A|1177
9J1M|1|A|C|1178
9J1M|1|A|A|1179
9J1M|1|A|A|1180
*
9J1M|1|A|U|1237
9J1M|1|A|C|1238
9J1M|1|A|A|1239
9J1M|1|A|A|1240
9J1M|1|A|G|1241
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- Large ribosomal subunit protein uL6
Coloring options: