IL_9J1M_055

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CAAG*UGACG

Length

9 nucleotides

Bulged bases

9J1M|1|A|C|1762

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_055 not in the Motif Atlas

Geometric match to IL_5J7L_299

Geometric discrepancy: 0.1327

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

9J1M|1|A|C|1706
9J1M|1|A|A|1707
9J1M|1|A|A|1708
9J1M|1|A|G|1709
*
9J1M|1|A|U|1759
9J1M|1|A|G|1760
9J1M|1|A|A|1761
9J1M|1|A|C|1762
9J1M|1|A|G|1763

Current chains

Chain A

23S rRNA

Nearby chains