IL_9J1M_075

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GC*GCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_075 not in the Motif Atlas

Geometric match to IL_9DFE_076

Geometric discrepancy: 0.0775

The information below is about IL_9DFE_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24886.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

12

Unit IDs

9J1M|1|A|G|2171
9J1M|1|A|C|2172
*
9J1M|1|A|G|2202
9J1M|1|A|C|2203
9J1M|1|A|A|2204
9J1M|1|A|C|2205

Current chains

Chain A

23S rRNA

Nearby chains

Chain x

Mitochondrial domain of uncharacterised function (DUF1713)