IL_9J1M_130
3D structure
- PDB id
- 9J1M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KU13-bond Mycobacterium tuberculosis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- CAC*GAGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9J1M_130 not in the Motif Atlas
- Geometric match to IL_5J7L_021
- Geometric discrepancy: 0.2031
- The information below is about IL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33323.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9J1M|1|a|C|439
9J1M|1|a|A|440
9J1M|1|a|C|441
*
9J1M|1|a|G|483
9J1M|1|a|A|484
9J1M|1|a|G|485
9J1M|1|a|A|486
9J1M|1|a|A|487
9J1M|1|a|G|488
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- Small ribosomal subunit protein uS4
Coloring options: