IL_9J1M_157

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

9J1M|1|a|U|1040

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_157 not in the Motif Atlas

Geometric match to IL_4LFB_042

Geometric discrepancy: 0.1109

The information below is about IL_4LFB_042

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

129

Unit IDs

9J1M|1|a|G|1039
9J1M|1|a|U|1040
9J1M|1|a|G|1041
*
9J1M|1|a|C|1200
9J1M|1|a|C|1201

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

Small ribosomal subunit protein uS14B