IL_9J1M_165
3D structure
- PDB id
- 9J1M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KU13-bond Mycobacterium tuberculosis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- UACAAAG*UUAAAAG
- Length
- 14 nucleotides
- Bulged bases
- 9J1M|1|a|A|1278
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9J1M_165 not in the Motif Atlas
- Geometric match to IL_4LFB_051
- Geometric discrepancy: 0.2152
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
9J1M|1|a|U|1239
9J1M|1|a|A|1240
9J1M|1|a|C|1241
9J1M|1|a|A|1242
9J1M|1|a|A|1243
9J1M|1|a|A|1244
9J1M|1|a|G|1245
*
9J1M|1|a|U|1276
9J1M|1|a|U|1277
9J1M|1|a|A|1278
9J1M|1|a|A|1279
9J1M|1|a|A|1280
9J1M|1|a|A|1281
9J1M|1|a|G|1282
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain g
- Small ribosomal subunit protein uS7
- Chain i
- Small ribosomal subunit protein uS9
- Chain j
- Small ribosomal subunit protein uS10
- Chain n
- Small ribosomal subunit protein uS14B
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