IL_9J1M_169

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

9J1M|1|a|C|1393, 9J1M|1|a|A|1496

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_169 not in the Motif Atlas

Geometric match to IL_8P9A_452

Geometric discrepancy: 0.091

The information below is about IL_8P9A_452

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_18228.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

9J1M|1|a|C|1392
9J1M|1|a|C|1393
9J1M|1|a|G|1394
*
9J1M|1|a|C|1494
9J1M|1|a|A|1495
9J1M|1|a|A|1496
9J1M|1|a|G|1497

Current chains

Chain a

16S rRNA

Nearby chains

Chain x

Mitochondrial domain of uncharacterised function (DUF1713)