IL_9JMK_031

3D structure

PDB id

9JMK (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Ribosomal Subunit precursor state III

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA

Length

34 nucleotides

Bulged bases

9JMK|1|A|A|1127, 9JMK|1|A|U|1130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JMK|1|A|U|1018
9JMK|1|A|U|1019
9JMK|1|A|A|1020
9JMK|1|A|A|1021
9JMK|1|A|G|1022
9JMK|1|A|U|1023
9JMK|1|A|G|1024
9JMK|1|A|G|1025
9JMK|1|A|G|1026
9JMK|1|A|A|1027
9JMK|1|A|A|1028
9JMK|1|A|A|1029
9JMK|1|A|C|1030
*
9JMK|1|A|G|1124
9JMK|1|A|G|1125
9JMK|1|A|A|1126
9JMK|1|A|A|1127
9JMK|1|A|G|1128
9JMK|1|A|A|1129
9JMK|1|A|U|1130
9JMK|1|A|G|1131
9JMK|1|A|U|1132
9JMK|1|A|A|1133
9JMK|1|A|A|1134
9JMK|1|A|C|1135
9JMK|1|A|G|1136
9JMK|1|A|G|1137
9JMK|1|A|G|1138
9JMK|1|A|G|1139
9JMK|1|A|C|1140
9JMK|1|A|U|1141
9JMK|1|A|A|1142
9JMK|1|A|A|1143
9JMK|1|A|A|1144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13