IL_9JMK_041

3D structure

PDB id

9JMK (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Ribosomal Subunit precursor state III

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGCGAGG*CGUAGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JMK|1|A|G|1355
9JMK|1|A|G|1356
9JMK|1|A|C|1357
9JMK|1|A|G|1358
9JMK|1|A|A|1359
9JMK|1|A|G|1360
9JMK|1|A|G|1361
*
9JMK|1|A|C|1370
9JMK|1|A|G|1371
9JMK|1|A|U|1372
9JMK|1|A|A|1373
9JMK|1|A|G|1374
9JMK|1|A|U|1375
9JMK|1|A|C|1376

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2