IL_9JMK_059
3D structure
- PDB id
- 9JMK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S Ribosomal Subunit precursor state III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9JMK_059 not in the Motif Atlas
- Homologous match to IL_7A0S_081
- Geometric discrepancy: 0.1728
- The information below is about IL_7A0S_081
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
9JMK|1|A|C|2350
9JMK|1|A|G|2351
9JMK|1|A|A|2352
9JMK|1|A|G|2353
*
9JMK|1|A|C|2364
9JMK|1|A|G|2365
9JMK|1|A|A|2366
9JMK|1|A|G|2367
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain W
- 50S ribosomal protein L27
Coloring options: