IL_9JPM_137

3D structure

PDB id

9JPM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5s2U34) and mRNA(AAA)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JPM|1|a|U|1851
9JPM|1|a|U|1852
9JPM|1|a|A|1853
9JPM|1|a|A|1854
9JPM|1|a|U|1855
9JPM|1|a|U|1856
9JPM|1|a|G|1857
9JPM|1|a|A|1858
9JPM|1|a|U|1859
9JPM|1|a|G|1860
*
9JPM|1|a|U|1882
9JPM|1|a|U|1883
9JPM|1|a|G|1884
9JPM|1|a|A|1885
9JPM|1|a|U|1886
9JPM|1|a|C|1887
9JPM|1|a|G|1888
9JPM|1|a|A|1889
9JPM|1|a|A|1890
9JPM|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains