IL_9JPO_138

3D structure

PDB id

9JPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.18 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JPO|1|a|U|1851
9JPO|1|a|U|1852
9JPO|1|a|A|1853
9JPO|1|a|A|1854
9JPO|1|a|U|1855
9JPO|1|a|U|1856
9JPO|1|a|G|1857
9JPO|1|a|A|1858
9JPO|1|a|U|1859
9JPO|1|a|G|1860
*
9JPO|1|a|U|1882
9JPO|1|a|U|1883
9JPO|1|a|G|1884
9JPO|1|a|A|1885
9JPO|1|a|U|1886
9JPO|1|a|C|1887
9JPO|1|a|G|1888
9JPO|1|a|A|1889
9JPO|1|a|A|1890
9JPO|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains