IL_9JSR_047
3D structure
- PDB id
- 9JSR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S precursor - Erm complex (C-I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAUAAG*CGAAAC
- Length
- 12 nucleotides
- Bulged bases
- 9JSR|1|A|A|2765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9JSR_047 not in the Motif Atlas
- Homologous match to IL_7A0S_098
- Geometric discrepancy: 0.3069
- The information below is about IL_7A0S_098
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
9JSR|1|A|G|2737
9JSR|1|A|A|2738
9JSR|1|A|U|2739
9JSR|1|A|A|2740
9JSR|1|A|A|2741
9JSR|1|A|G|2742
*
9JSR|1|A|C|2762
9JSR|1|A|G|2763
9JSR|1|A|A|2764
9JSR|1|A|A|2765
9JSR|1|A|A|2766
9JSR|1|A|C|2767
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain C
- rRNA adenine N-6-methyltransferase
- Chain J
- 50S ribosomal protein L13
Coloring options: