IL_9K0Z_011
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGAUAAG*UCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 9K0Z|1|A|U|170
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_011 not in the Motif Atlas
- Geometric match to IL_5J7L_012
- Geometric discrepancy: 0.1257
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9K0Z|1|A|G|144
9K0Z|1|A|G|145
9K0Z|1|A|A|146
9K0Z|1|A|U|147
9K0Z|1|A|A|148
9K0Z|1|A|A|149
9K0Z|1|A|G|150
*
9K0Z|1|A|U|165
9K0Z|1|A|C|166
9K0Z|1|A|U|167
9K0Z|1|A|A|168
9K0Z|1|A|A|169
9K0Z|1|A|U|170
9K0Z|1|A|A|171
9K0Z|1|A|C|172
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain T
- Small ribosomal subunit protein bS20
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